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Human element [ hs90 ]


Position: chr16:6,548,841-6,550,064 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RBFOX1(intragenic)

Timepoints:

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gcatGGTAAAAGCCATGGCACAGTtagtatctgatccctcaactaaaatactgacaccac
cttctataggcttatacggcaagtagcagtatgccttggagccttctcctccaatacacc
ccattggcaaaaagcgacttatggttaatgcaacagtgaaaataaattattaccattcta
tgattgtgtgacaggttagtaattaacttatgtcaccagttggcttcgcacaactgtgtt
tattcagctccgtggagcacttttcagggaaaaagaaattatcagccaggcagcctttgt
ttactgtggaagctggatgctggtggactgcatctcctcctattgactaggaaataagtt
ggttgttaggacatgattttccattcttcaaaatgatatggtgatgcaaggaatttgaaa
gctacactggaattagaaaagcataaagaaattgccttttatgcactaatcgagccatta
tgcctgtttcctttggggtatttttttactgtatagacaccacaaacagccatgtgtaaa
aaaaaaaggtatgaaaaatcttaattaaaataaaaactgtagtatgtgtttttatcccat
tgtaggttaagtgggtatcacacagcctagggacaatggtattagatttgtaataagcac
aagtaaagcttttcattttgattggattgggtgtatttttcatcagcatctcccgtgtga
gccatgattccaagacagagtcttgtaatcttctgcagtgggaatgattcagcttaaaaa
tcagtagggcatgaggtatttcaagttctcattattgtaatgtgtcaacatcacttcagt
gaccccagagtcctatgttggctggttttccccctgatttattgtgcaatctcgtagggc
aaactataatttcacttggaatcagaaagtctccatttatggtttgtgtcccagtctcca
gtcattagggcattcgcgggtaatcgatacctcctcttgttgctaacagctgaatgaagt
tgtcacctgcttagattacaaaggagtcgggtaaaaggatgtggtaagggtgagtacatt
gaacaagttctgttttgagaagggctttctctgatgtttacctgccgcctcgtgaagggc
tttcagcattttttgggacctcctttctagaaacccttatcactgaattagcacaatgtt
ttatTTCTTCTTTTGTGAACCGGG
Primer
(+)CACCGGTAAAAGCCATGGCACAGT
(+)CCCGGTTCACAAAAGAAGAA