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Human element [ hs87 ]


Position: chr16:7,758,525-7,759,863 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RBFOX1(intragenic)

Timepoints:
e11.5

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACaGACCCTTTAAGGCTGCTTCCATTCAaatatacttgttcctttccattctaagatgc
tggacactaacttcagacaggttcacttcaccctttctgattcaccctatttcacttgaa
tggtgacagctgaatcaggagaaaaaggcactctcttgagaattaaaataccctctgtgg
gtgctgggcttaatacttgaagttgtttctttcttacctacctcagtctctaaggcagct
acttgagcagtgtagaaacagtattatggggggaggcagggaaaagcatatgtaagtacg
tgtgtatatatgtatttatctgtcaaacatagcaatagcaaccatgttaaatgcacaaaa
aatgtatcatgtacagatgaactcttcttatactacacagcagagtagaatttgcttctc
actggaagatgagtagggcccctgcatactgtcttggtattttggattttatgattgtta
ttgttttgtaattgcatactgtggatcaatcttcacctctattttcctttcagttacgga
cgagtttatgctgccgacccctaccaccacgcacttgctccagcccccacctacggcgtt
ggtgccatggtgagtacaagtttctccttgtcctcactttctcctgcctcccttcccttt
ccccagctgggacctcagtacgggttgacgtcctctcacttcccgttaattgaatttgtc
tcttgtgctaacagcagctaaaatgccacattaatcctcccagtaaacttgataaatgtc
ttaatttcttggcaatgtagtgcatgtaagttattatatttctaattttgcaagtctcac
ctagcagagcacttaccttaatggaataattagtcattttgataattaaatccatcacta
acagaatgcagtgtcaatgcagaacttttttttttctttttttttccctcccttgctgct
cattcacatagccccaaggttccagccccagcacagacttcagaggagctaagctgcaca
cttccaggcctctgctgtcaggcagctgagaatctgactgcctctcctcccctattacaa
ttcatgtttaaagtcatagtcgcccaggaaagaaaatagagaggggcacactttgtgtgt
gtacctagtacataagaaagtagaaggaatcagctgggtttgggggttgccttttgtttt
ggggcaggtctgggtttttgttttgggagggggtggggggagggtaaaaaatgggaggta
agggtggggtgaacttgcctgtacttgttcaaacttctatgcactgaaactcttGAGTAC
AGTAAGACGTGCCCATCAC
Primer
(+)CACCGACCCTTTAAGGCTGCTTCCATTCA
(+)GTGATGGGCACGTCTTACTGTACTC