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Human element [ hs55 ]


Position: chr16:54,092,614-54,094,121 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FTO-IT1 - IRX3

Timepoints:

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GACACCAAAGATTACTTGGCTTTTCcccccacctcctgtgcatgaaccggagaatgatgg
aacaattggttgtgtttggggcctttatttgcttttttccctcctctctttaaaaaataa
ataaataaataaaaaatctgcctttgtctgctgctactgtgtctatttttgttgtggtgg
tggttgttttaaataggagaacttgtgaaatgagactgcataaaagatggacttgtttta
tatatgggatattgcctgtccttcagatctatgtgtctcgcttatggaatgaaccaaagt
aggagagataaactaatattttgtatcagctcagccagacaatacagatgataaagatgt
ttcatcttcttatgcatgcagaaaatatgaaaaatcgtagtttacacacatttgctcaat
tcaagtgtaaaattgggcccctcgattgccctgggccacagtggctgtgttaaggaagct
cgatttaccttgcagccgagtgaaaaatgatcagaatattagactcatctagcccacatt
aaggagccattgcatttcccgacaattgtatgctatctcaatatgaaaacagagcaattt
caactcatatcaggttatgatcggcaattacagttgcataattcacctagtcatctcttt
gcagggcctttattttccctcttggtgacattcctgagaaagtgcctgataaaaatgtca
tatatcatcccagctttagaactcgtgagggggtaatctgctatgccttgctgagcccat
attcatcactggatttttgacttggaggggtcatggcactcataatttcctgtttgatat
tgtcctcaccagctctgacaaggggctgtaaaagctcggttgtaggcagtggttaagcgc
tgctccagtggggcccatcaccagcaataagagtgcattactgtggctcatgctggagtt
ggccgtttcgaagataattagatttgatgtcaacatttctttatcacctgcatccttttg
tgcatctgtgtgtcaagttgttctttccggatttattagcaccctcagagctactctcta
tctgtcagcttgtgtgctgtttgtgttgacagttgtaaagttaattactagtactaatga
gcatcgggcttttggtggacatggcgttttggacatttaaaactataattagtttttttt
tgttttttgttttttgttttctgtgtgtggtgcttcagtacaaaataaaacgtgttttaa
aaaaatacgtcccttccattgcattttgacattctgtgtgcagtcaacttatcttttatt
caaaggctccaaaaactcagttctgtttctttttaaaacagacttccttttcattgtaac
tccatgaataatttcttttgttccttacttctcttccaacttgataacgtgaccatttca
tatgccttgagaattaaggatagtgatggtggaatgatcaaaaAATGTGCTGGGTAAATG
TTCATCTC
Primer
(+)GACACCAAAGATTACTTGGCTTTTC
(+)GAGATGAACATTTACCCAGCACATT