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Human element [ hs47 ]


Position: chr16:54,540,302-54,541,446 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: IRX3 - CRNDE

Timepoints:

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATTTAAAATCCCTTGCTTGTTGGAGattttgtgaaatctgtgtgtgtgcgcgcgtgtgtg
ttttaagagtgaggcacccaattgaaacaaaagcttatgaaaatcatagtgaggaaagct
ttctagggcgtctggaggggcttcgctacctggggcatactctttatgacagttctcggg
atcacatttggggttgggggggcatcaggggtgcgagctggagggatctaggtcaaggac
aaatgcattcctctctctgcttgaaataacaaataagccgactcaccagagaagaatcat
taaaaataatttgcacaagctttcggttgtgtgagctcttttttgatacaatatttcctt
ccatgattatcactgcggacatgtcccagccatatggaagtgagctgggctgggagcttc
cacaatacctgagtggttaattaagagccgttgcccggccacaagaagcaggtttgaaat
ccctcttcagtctccgacaatgagtagcttttttagcagcagaagtcaccagggacagcc
agaagcgagggtaattatttgagataacatacagctgaagagagtgtgtgtgagtgcaga
gaggggcgggggatctggggggagcagtgtgcagttgaaagaagggcaacagtagagaaa
agtctataataaaaaggtcaacatctcctatttttctgtacagtgtcgacagtctgtaat
gcctttttagcatgaatgacaacggattctgtcttttttttaaaaaggggaatatcttat
tttgtattcaaactttgcaattgtgagttcaggcctgccagctccgtgtgaataagctat
tctcactttatcagggtttgctgaactgactttgattgcattgttgcaaaatagcagtaa
tttttccattaacccatacaaaccctcagcgagcaggagaacaaagaaatatcagaggga
tgaaagccatggagtgccgggagggaagccaggagtttcctaaatggctgtaaatgcagc
tgcacacaccagcttggtagcctggtggggggctcatgagggatgccattttaggttccc
tttggggtcccttggggtttgagtcccagtgggcacctttcATCCTCTCTGCCAAATTCT
ATTGT
Primer
(+)ATTTAAAATCCCTTGCTTGTTGGAG
(+)ACAATAGAATTTGGCAGAGAGGAT