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Human element [ hs36 ]


Position: chr16:54,657,182-54,658,317 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: IRX3 - CRNDE

Timepoints:

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GATATGCTCTTACAAACCGACACCTataatttatgtctcggatccagtcagaaaaagaaa
cgttctctttccaaattcaattatggtcctcataataattaataacaataatagttgttg
ctgttctcatttgagtattatatactataaggcaaccccccaagtttaatttatgaccaa
ataaatgggctgatggagaggaatggccctgcatttttcagtataatattttgttgcatt
tgcatttggaggaggatttgtggtgagctggaggattaaatcccatgaaatcattataca
aatttcaaaatgtcaagtactctgatagagattatgattttatcttcttattttgacagg
aaaccgtgtgtggccacctctgtcttagaacaagtgatgaagggaggccaggggagacca
aataaagatagaggagcttgcgagtttcctgatcagctgtcttttcattctgctcgcttg
tatgacagagcgtaatagacattttcctttgcacaaaataataagagcagtacttatcgc
gcggtgcctccagccagtggcaaaaggaaattagaaaagtccaatgaagctgagaagtaa
ttaatcatcatacagtggagcctgtcaaatcagaagggtccttccagctgataatgctcc
ccaactcaatttagactgatagaaattagaattctttttttcctctggcaaaaacaaaaa
gacaagagttagcacaaacacggccaactgttggctttcttgactgcctgacccatttac
agcaatgtttgcatcaagtttaactcaagccaaaattgaagcaacatcatttactcctca
aggcaatgggaaatcatcactatgctgttttaagactccccctccaaccaccaccgccct
ttcttctcccctttacccacacgaatagccatggctgcataagaaaaattaaaggttggt
tctattgatcaggttggctactctctccatagagttgtgggagggcagcatttaacaagg
cctgtaatgagtctggactctttggagatcaagtgaaataaataaaatgggttcaatagg
agccacagagggcttttggcagagggaagtaGGATAACAAGCTGCTGTCAGATTTT
Primer
(+)GATATGCTCTTACAAACCGACACCT
(+)AAAATCTGACAGCAGCTTGTTATCC