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Human element [ hs31 ]


Position: chr16:54,799,102-54,800,160 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: IRX3 - CRNDE

Timepoints:
e11.5

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AACATCCAACCAAAAACTGATTTGTtgaaagatgtctgtgctattatccctactgtggtt
tctttatgaacttggataaagaggaggaatttatttgaaagtcaatagactacagtattt
atttacaggtctactgtatgtgctagtttaaatttaacactttgaatggggtagaaacaa
atgcatcggaatttgaccaaggatacattcatatgtcagtttaatgctccagctgtttaa
tcaaaatatgaataaaaggtctaaagcccaacaagcaaaaatatcatagttgtgggattc
gccgtttgcttccccattgtcagccaattactgtgcaatttttccctgtgactgaataac
taactgttagcaaataatgaaaaggcaattacagcgatgctttgttcctattacttcctt
cattttatccaggctgtaattattgtcagagctggaggtttactgtaccatggaagcagc
accaagaaagaaaatggaatgggctggtgcatggaaaattgcaaatgtcacagctacctt
catcggcactgttggacttctgagaataaaaaatcagaggaaaaagctctccatgtgggt
tttacaaattccctacctcaagctgttgtggcgactggggaagaggggacagcggtaggg
gtggggggcaggcaggaatcaggcatgaggtttgttctttttgtgtgtgtgcgattccca
aagggctgtgcattttcaccgcagtcggcctgaaactgattcatggaactcttctttagc
ctttgcttctcattaatggtctccatgctgtttcataatggggagtggcatataaatgat
gcattttatggggtttgatctttcttcagagagaaaatatgccacatatggacagatgtc
tgaaaaagaaaatgatgatcatgccctctttgtgcagttgctgggacctatttttagaag
ctgattttcactgaccatatgtaacataccttcctttttgactttatttttattaactag
aaactgtaagataaGACAAAAGAGATAGAGGCACATTCC
Primer
(+)aacatccaaccaaaaactgatttgt
(+)ggaatgtgcctctatctcttttgtc