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Human element [ hs25 ]


Position: chr16:55,240,593-55,241,874 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: IRX5 - IRX6

Timepoints:

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CATCCTCCAGTTTAAAAACATGTCAggataatcctgcccattgtgatgcctgtggcttct
ggccacacgtgaaaggatgggcagaggtatttgaaatcagtctttctgtccccattcctt
aaagcctgccacatgcaacaaacagaaaactgtgtgtgccttcatttcctaagctacttt
gatgggtttctattactgacaaaaaattaaagcaagcacaagaataacagctattcctgt
tgatgggtgtttatgccctttgtgcctggccctacaggtgggttaactcatcgggtcttc
ccaataacctctaaggtagtcatggctacaatccccataaacaggctcagaggggctgag
tacctagtctaaggctgcacagcaagcatttagcagaaacacaatttgaacccatctgtg
tgaattccaagtcccaagtgttccaaccagcgtaaatgcccttggcttggaaagacgggg
gctgagggcattaacctagggctcagaggcctccctccccataactattcaggccaagga
tccagcctaaggcttggcgccccaacttctaaagctgggggaaggggcaggaccatgaag
gaggatgggagagggggaagcatcccacagcctggtgctcacctcctgttccaactccct
ccccaccctcaacaccacaatggccaatcaatacaggcttacattttatgagacaaggag
tcaacttgttcaattacgggggagacagctctattctttcgtaacaagtaatctgagtag
ggaaatcgatcctgagaggccccatgcacgctggctaattttatattacccttagccaat
gggcgagcacagagtaatgaagttgttgttacagttgattatggggggggtggggatcaa
tggagggaaaatctgaggctcagcgtcaccgctgtagcaggaagggggtgggggactcag
gctgggggagcagccttcctttattcgtattccctgcccaaacacggtcagctcctgccg
aaacccctaagacagaagcatctctcaggatggagacccagagactccccaccacccagg
tcctgttgccccctgacagccagagtccaggaagaggccaccagagatgcaagggtggat
ggaaatggggagaggtaaagcccccgtcatcacaaggctgggcttgtgaccaccacgttt
cctctctgtccttgcaagtggcttttggacaggggccaggtttggcctggcagtgaaTCC
TCCTTGGCATCTTGATGACTCT
Primer
(+)CATCCTCCAGTTTAAAAACATGTCA
(+)AGAGTCATCAAGATGCCAAGGAGGA