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Human element [ hs109 ]


Position: chr16:73,352,312-73,354,585 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: C16orf47 - LOC100506172

Timepoints:

Publications:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGTCAGCAACCCCATACAGtgtagagcactgtttgtaaaaattcaaaaatgtccaaaga
tgcaattaggctttacttattactattgggtgactgtttttgcttttttttttctttatt
cctttttcttctggctaataatgcttctgaggtttggataagtaactaagaggaaggaga
tctccttctagtccatcctgctgccgacaattaagaaacctcaaagtaatttttgaaaat
gtcagcgtctcatttagcaaaaggataaataataaatgaagcgtaatcactgtcctgtgc
tggtggtacagcttcgcggtgtcattagtaaactaacggtataatatctttgtgtcacag
tttaattatatcttgtaattagtttcagcaatggattgcatagagtcaggccccctgagc
taaacaaaaggtaatagaacttttcagcgcccctgcataaatcaattatgaaagtgtcct
atgctatttgaagcttgtttgctgtaattttatgcacaaagcccaactggcccttcttgc
ttgtggagggctattcaccccaccccacacttgtctgcagctgagcctgcggtcggccca
cacgcagcctggcccactggtgcatttctcaggaccagctcagcagtaaataccatggag
ggggtgaggtgctgaggggaggggaggggaggtgtggaatggggggggcagaggacgcac
aaggaccggagcaggtaatagatgcgccatgtgcaagaaagcagggaatcaaataggaaa
agatgtgagggcttggaagaatgattctttatgcttccctgaacaaagatgagaaggtta
ggagcatcaaaggccaagcaacgttgatgaatatgggcaggcagacgagatacatgtccc
tttatcattttatcctttcaacatccccactctcgccacgtggttggaattggaaccagc
acaggttacttggcaataggggatagggaaggagaatccacatctttaattgggtctaat
tcgggtcccacagagctcagaaactgtaaagggcttccgagcgttgttgagggctagctg
tggtcaccaggcccagacaggagagtcatggagtcccgctgggggaagctaagaagaaac
tcaggggcggggggttggttaagtccaaatgccaccaatacgtgtgatcatctctttttg
atcaaactgtaaggcatggcagagagtgggggtggggtccacattcaaagtcctcatcaa
gttggctttgaaagtaagtctagtgccacactggcctttctgtttatacaacaatttata
ggtttaaacgaaaccccgcttgaaaaagcagactgaatcttcctattgtgagcacttcag
caaatttaacaaaagaaagagcccaggcgaagaagaagagagaggagagagacagagaga
aaggtccagtcctcagactggtgtgctgcaatctggctggttgctatggcgacgtgatgg
tttgttcacatggcaacataccttaggtccactattaaaatgatgagagtgaactcggtt
gcattaaggaaagtgtgctgtatgctaaagcgagtctttatctccagagagagctggaca
gagactggcatccagtacaaatgagggagaaaaggaggaggaggtaaaggttggaggtct
ggaagagggaagaaccgcagggatgcaatcactatgaaaagaaagaccctcagttctgtg
tctcagtcgagggcctgggattcagaaggtagacaatgagttttgtttgacatggaattc
atcgttcaaatcagcccatcagactaatgaccccttatttaaaaaacaaaacaaaacata
ttccagatgaacctgctgtaccttggctgtagaaaacacaacagtgaacaaaactcaacc
catgagctgtggctataaccaatagccaagcacgaatgccacttaaataaaatactctaa
taaccgcgagggtggcaaattacacggcatttatttatcgaacataaaagtccattgaca
gctacagatccacatcatctcacatttgagctagtggggaagatttcctttggaaatcgg
gtttcctgtttcctttaacatagtgacaatttttcctcctactgatgtcgaaagggtggt
gatatttcagtgggtattattccaacagccctacctatctacctgtgcttggtttctttc
tgctatttagcaagcactgctgtggcacacatgaGACAGCCAGAAGTCTCTGGG
Primer
(+)AGGTCAGCAACCCCATACAG
(+)CCCAGAGACTTCTGGCTGTC